Concepedia

A multi-purpose, regenerable, proteome-scale, human phosphoserine resource for phosphoproteomics

Brandon M. Gassaway, Jiaming Li, Ramin Rad, Julian Mintseris, Kyle Mohler, Tyler Levy, Mike Aguiar, Sean A. Beausoleil, João A. Paulo, Jesse Rinehart,

Nature Methods · 2022 · 53 citations · 41 references

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Concepts

References

41

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

Jürgen Cox, Nadin Neuhauser, Annette Michalski et al. · Journal of Proteome Research · 2011 · 5.9K citations · Full text

, , +17

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

Joshua E. Elias, Steven P. Gygi · Nature Methods · 2007 · 4.1K citations

, , +16

PhosphoSitePlus, 2014: mutations, PTMs and recalibrations

Peter Hornbeck, Bin Zhang, Beth Murray et al. · Nucleic Acids Research · 2014 · 3.5K citations · Full text

, , +16

MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry–based proteomics

Andy T. Kong, Felipe da Veiga Leprevost, Dmitry M. Avtonomov et al. · Nature Methods · 2017 · 2.6K citations · Full text

, , +14

A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression

Edward L. Huttlin, Mark P. Jedrychowski, Joshua E. Elias et al. · Cell · 2010 · 1.8K citations · Full text

, , +11