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MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry–based proteomics

Andy T. Kong, Felipe da Veiga Leprevost, Dmitry M. Avtonomov, Dattatreya Mellacheruvu, Alexey I. Nesvizhskii

Nature Methods · 2017 · 2.6K citations · 49 references

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References

49

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

Jürgen Cox, Nadin Neuhauser, Annette Michalski et al. · Journal of Proteome Research · 2011 · 5.9K citations · Full text

, , +17

Empirical Statistical Model To Estimate the Accuracy of Peptide Identifications Made by MS/MS and Database Search

Andrew Keller, Alexey I. Nesvizhskii, Eugene Kolker et al. · Analytical Chemistry · 2002 · 5K citations

, , +17

A Statistical Model for Identifying Proteins by Tandem Mass Spectrometry

Alexey I. Nesvizhskii, Andrew Keller, Eugene Kolker et al. · Analytical Chemistry · 2003 · 5K citations

, , +17

TANDEM: matching proteins with tandem mass spectra

Robertson Craig, Ronald C. Beavis · Bioinformatics · 2004 · 2.6K citations · Full text

, , +17

MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry–based proteomics

Andy T. Kong, Felipe da Veiga Leprevost, Dmitry M. Avtonomov et al. · Nature Methods · 2017 · 2.6K citations · Full text

, , +14