Luminescence · 2022 · 11 citations · 66 references
Life SciencesBiochemistryPharmacologyPharmacodynamicsStructural BiologyStructure-activity RelationshipsEgg AllergyEgg White BiologyProtein StructureProteins In FoodsCarrier Protein InteractionsFlavonoid-mediated InteractionsHydrophobic InteractionsMajor Food AllergensOvalbumin AllergenicityProtein StabilityProtein Structural ChangesStatic Quenching
Ovalbumin (OVA), the major component of egg white, has been used as a model carrier protein to study the interaction of four bioactive phytochemicals 6-hydroxyflavone, chrysin, naringin, and naringenin. A static quenching mechanism was primarily associated with the complexation of the flavonoids with OVA. Hydrophobic forces play a major part in the stability of the complexes. The structural changes within the protein in response to flavonoid binding revealed a decrease in OVA's α-helical content. The hypothesized binding site for flavonoids in OVA overlaps with one or more immunoglobulin E-binding epitopes that may have some effect in the immunoglobulin E response pathway. The flavonoids remain in the same binding site throughout the simulation time and impart protein stability by forming different noncovalent interactions. This study presents comprehensive information about the interaction of the flavonoids with OVA and the associated structural variations after the binding, which might help researchers better comprehend similar medication pharmacodynamics and provide critical information for future therapeutic development.
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GROMACS: Fast, flexible, and free
David van der Spoel, Erik Lindahl, Berk Hess et al. · Journal of Computational Chemistry · 2005 · 19.1K citations
Natural Sciences, Chemistry, Physics +17
Comparative Protein Structure Modeling Using MODELLER
Benjamin Webb, Andrej Šali · Current Protocols in Bioinformatics · 2016 · 4.5K citations · Full text