Shortened egg reappearance periods of equine cyathostomins following ivermectin or moxidectin treatment: morphological and molecular investigation of efficacy and species composition

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DADA2: High-resolution sample inference from Illumina amplicon data

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Cutadapt removes adapter sequences from high-throughput sequencing reads

Marcel Martin · EMBnet journal · 2011 · 35.8K citations · Full text

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Improved software detection and extraction of ITS1 and <scp>ITS</scp> 2 from ribosomal <scp>ITS</scp> sequences of fungi and other eukaryotes for analysis of environmental sequencing data

Johan Bengtsson‐Palme, Martin Ryberg, Martin Hartmann et al. · Methods in Ecology and Evolution · 2013 · 1.4K citations · Full text

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Exploring the Gastrointestinal “Nemabiome”: Deep Amplicon Sequencing to Quantify the Species Composition of Parasitic Nematode Communities

Russell W. Avramenko, Elizabeth Redman, R.E. Lewis et al. · PLoS ONE · 2015 · 341 citations · Full text

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