Concepedia

Fishing for the Microbiome of Tropical Tuna

Elsa Gadoin, Christelle Desnues, Emmanuelle Roque d’Orbcastel, Thierry Bouvier, Jean‐Christophe Auguet, Laurent Dagorn, Jean-Luc Aboya Moroh, Antoinette Adingra, Yvan Bettarel

Microbial Ecology · 2022 · 10 citations · 83 references

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83

DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 36.3K citations

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The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

Christian Quast, Elmar Pruesse, Pelin Yilmaz et al. · Nucleic Acids Research · 2012 · 34K citations · Full text

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phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

Paul J. McMurdie, Susan Holmes · PLoS ONE · 2013 · 22.5K citations · Full text

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APE: Analyses of Phylogenetics and Evolution in R language

Emmanuel Paradis, Julien Claude, Korbinian Strimmer · Bioinformatics · 2004 · 12.6K citations · Full text

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Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

Anna Klindworth, Elmar Pruesse, Timmy Schweer et al. · Nucleic Acids Research · 2012 · 9K citations · Full text

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