Frontiers in Plant Science · 2022 · 19 citations · 51 references
Life SciencesBotanyPlant SciencesMetabolomicsPlant BiochemistryTranscriptomicsAbscisic Acid BiologyFruit BiochemistryFruit PhysiologyFruit RipeningPlant MetabolomicsCo-regulated Gene ModulesFruit Ascorbic Acid MetabolismFruit Development StagesFruit Growth ResponseFruit Growth StagesFruit TranscriptomicsMolecular Regulation Of Fruit DevelopmentNative Tree Species
Chinese jujube ( Ziziphus jujuba ) is a vital economic tree native to China. Jujube fruit with abundant L-Ascorbic Acid (AsA) is an ideal material for studying the mechanism of AsA biosynthesis and metabolism. However, the key transcription factors regulating AsA anabolism in jujube have not been reported. Here, we used jujube variety “Mazao” as the experimental material, conducted an integrative analysis of transcriptome and metabolome to investigate changes in differential genes and metabolites, and find the key genes regulating AsA during jujube fruit growth. The results showed that AsA was mostly synthesized in the young stage and enlargement stage, ZjMDHAR gene takes an important part in the AsA recycling. Three gene networks/modules were highly correlated with AsA, among them, three genes were identified as candidates controlling AsA, including ZjERF17 (LOC107404975), ZjbZIP9 (LOC107406320), and ZjGBF4 (LOC107421670). These results provide new directions and insights for further study on the regulation mechanism of AsA in jujube.
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Mutation of the mouse klotho gene leads to a syndrome resembling ageing.
PubMed · 1997 · 66.6K citations
WGCNA: an R package for weighted correlation network analysis
Peter Langfelder, Steve Horvath · BMC Bioinformatics · 2008 · 29.1K citations · Full text