Concepedia

Structural Variant Detection from Long-Read Sequencing Data with cuteSV

Tao Jiang, Shiqi Liu, Shuqi Cao, Yadong Wang

Methods in molecular biology · 2022 · 37 citations · 11 references

DOI

Concepts

References

11

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text

, , +17

Minimap2: pairwise alignment for nucleotide sequences

Heng Li · Bioinformatics · 2018 · 16.8K citations · Full text

, , +17

An integrated map of structural variation in 2,504 human genomes

Peter H. Sudmant, Tobias Rausch, Eugene J. Gardner et al. · Nature · 2015 · 2.7K citations · Full text

, , +17

Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome

Aaron M. Wenger, Paul Peluso, William J. Rowell et al. · Nature Biotechnology · 2019 · 1.9K citations · Full text

, , +16

Accurate detection of complex structural variations using single-molecule sequencing

Fritz J. Sedlazeck, Philipp Rescheneder, Moritz Smolka et al. · Nature Methods · 2018 · 1.9K citations

, , +15