Cancers · 2022 · 18 citations · 71 references
Natural SciencesBiochemistryProstate DiseaseSpectroscopic AnalysisSpectroscopyOptical SpectroscopyPrincipal Component AnalysisProstate CancerRaman SpectroscopySpectral Data ProcessingSpectral InterpretationLinear Discriminant AnalysisPrincipal Component Analysis FeaturesProstate Cancer DiagnosisRaman Data AnalysisSpectral Data PreprocessingSpectral FeaturesStatistical Discriminant AnalysisVibrational Modes
It is possible to obtain diagnostically relevant data on the changes in biochemical elements brought on by cancer via the use of multivariate analysis of vibrational spectra recorded on biological fluids. Prostate cancer and control groups included in this research generated almost similar SERS spectra, which means that the values of peak intensities present in SERS spectra can only give unspecific and limited information for distinguishing between the two groups. Our diagnostic algorithm for prostate cancer (PCa) differentiation was built using principal component analysis and linear discriminant analysis (PCA-LDA) analysis of spectral data, which has been widely used in spectral data management in many studies and has shown promising results so far. In order to fully utilize the entire SERS spectrum and automatically determine the most meaningful spectral features that can be used to differentiate PCa from healthy patients, we perform a multivariate analysis on both the entire and specific spectral intervals. Using the PCA-LDA model, the prostate cancer and control groups are clearly distinguished in our investigation. The separability of the following two data sets is also evaluated using two alternative discrimination techniques: principal least squares discriminant analysis (PLS-DA) and principal component analysis-support vector machine (PCA-SVM).
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Reference database of Raman spectra of biological molecules
Joke De Gelder, Kris De Gussem, Peter Vandenabeele et al. · Journal of Raman Spectroscopy · 2007 · 1.4K citations · Full text
Nicolae Leopold, Bernhard Lendl · The Journal of Physical Chemistry B · 2003 · 1.2K citations
Tumour microvesicles contain retrotransposon elements and amplified oncogene sequences
Leonora Balaj, Ryan Lessard, Lixin Dai et al. · Nature Communications · 2011 · 1.2K citations · Full text
Medicine, Cancer Biology, Oncology +14