Communications Biology · 2022 · 78 citations · 86 references
Life SciencesGeneticsMolecular GeneticsAgingEpigeneticsHuman GeneticsEpigenetics Of AgingGenetics Of AgingSingle-cell EpigenomicsTelomere BiologyCell-type-specific Differential ExpressionDifferential Transcript ExpressionGenome-wide Methylation AnalysisNonsense-mediated Mrna DecaySingle-cell Rna SequencingTelomere FunctionTelomere Length AnalysisTelomeric Repeats
The average length of telomere repeats (TL) declines with age and is considered to be a marker of biological ageing. Here, we measured TL in six blood cell types from 1046 individuals using the clinically validated Flow-FISH method. We identified remarkable cell-type-specific variations in TL. Host genetics, environmental, parental and intrinsic factors such as sex, parental age, and smoking are associated to variations in TL. By analysing the genome-wide methylation patterns, we identified that the association of maternal, but not paternal, age to TL is mediated by epigenetics. Single-cell RNA-sequencing data for 62 participants revealed differential gene expression in T-cells. Genes negatively associated with TL were enriched for pathways related to translation and nonsense-mediated decay. Altogether, this study addresses cell-type-specific differences in telomere biology and its relation to cell-type-specific gene expression and highlights how perinatal factors play a role in determining TL, on top of genetics and lifestyle.
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Integrated analysis of multimodal single-cell data
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Second-generation PLINK: rising to the challenge of larger and richer datasets
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