Microbiology Spectrum · 2022 · 20 citations · 70 references
Life SciencesInfectious DiseasesMicrobiologyBacteriologyGenomicsMedical MicrobiologyBacterial EpidemiologyBacterial GeneticsBacterial IdentificationBacterial InfectionsDiagnostic BacteriologyUrinary Tract InfectionsBacterial TypingEscherichia ColiGenomic Characterization Of PathogensGenomic Diversity AnalysisGenotypic Characterization Of IsolatesMolecular Typing Of BacteriaNosocomial Urinary Tract InfectionsUropathogenic Escherichia Coli
Analyzing the clonal structure and antimicrobial resistance of E. coli isolates implicated in uncomplicated urinary tract infections, one of the most frequent visits managed in primary health care, is of interest for clinicians to detect changes in the dynamics of emerging uropathogenic clones associated with the spread of fluoroquinolone resistance. It can also provide consensus concerning optimal control and antibiotic prescribing.
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BLAST+: architecture and applications
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ResFinder 4.0 for predictions of phenotypes from genotypes
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