Microbiology Spectrum · 2022 · 33 citations · 83 references
Life SciencesEcologySoil SciencesCommunity EcologyMicrobial EcologySoil MicrobiologyFungal DiversityMicrobial Community DynamicsMicrobial DiversityMicrobial Interactions In EcosystemsPlant-associated Microbial CommunitiesSoil BiodiversityFungal Community DiversityFungal Community EcologyHypervariable Region AnalysisInternal Transcribed Spacer SequencingMicrobial Community DiversitySoil Fungal DiversitySpecies Diversity GradientsSpecies Richness Gradients
Increasing biodiversity loss profoundly affects community structure and ecosystem functioning. Therefore, revealing the mechanisms associated with community assembly and co-occurrence network structure of microbes along plant species diversity gradients is very important for understanding biodiversity maintenance and community stability in response to plant diversity loss. Here, we compared the differences in community assembly and potential drivers of the co-occurrence network structure of soil fungi and bacteria in a subtropical tree diversity experiment. In addition to soil and spatial distance, plants are more strongly predictive of the community and co-occurrence network structure of fungi than those of bacteria. The study highlighted that plants play more important roles in shaping community assembly and interactions of fungi than of bacteria in the subtropical tree diversity experiment.
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DADA2: High-resolution sample inference from Illumina amplicon data
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Cutadapt removes adapter sequences from high-throughput sequencing reads
Marcel Martin · EMBnet journal · 2011 · 35.8K citations · Full text
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