Sediment prokaryotic assembly, methane cycling, and ammonia oxidation potentials in response to increasing antibiotic pollution at shrimp aquafarm

Search and clustering orders of magnitude faster than BLAST

R. C. Edgar · Bioinformatics · 2010 · 21.7K citations · Full text

Life Sciences, Bioinformatics, Biology +14

Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB

Todd Z. DeSantis, Philip Hugenholtz, N. Larsen et al. · Applied and Environmental Microbiology · 2006 · 11.2K citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

Bias in random forest variable importance measures: Illustrations, sources and a solution

Carolin Strobl, Anne‐Laure Boulesteix, Achim Zeileis et al. · BMC Bioinformatics · 2007 · 3.6K citations · Full text

Computing, Bioinformatics, Biostatistics +16

PyNAST: a flexible tool for aligning sequences to a template alignment

J. Gregory Caporaso, Kyle Bittinger, Frederic D. Bushman et al. · Bioinformatics · 2009 · 3.5K citations · Full text

Life Sciences, Bioinformatics, Microbiology +10

Molecular ecological network analyses

Ye Deng, Yi‐Huei Jiang, Yunfeng Yang et al. · BMC Bioinformatics · 2012 · 3.2K citations · Full text

Life Sciences, Bioinformatics, Ecology +6