Neuron · 2022 · 47 citations · 60 references
Life SciencesGeneticsNeuroscienceAutism Spectrum DisordersMolecular NeuroscienceNeurogeneticsAutism Spectrum Disorder GeneticsNeurodevelopmental DisordersPsychiatric GeneticsEph Receptor Signaling
60
HTSeq—a Python framework to work with high-throughput sequencing data
Simon Anders, Paul Theodor Pyl, Wolfgang Huber · Bioinformatics · 2014 · 22.7K citations · Full text
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
Mihaela Pertea, Geo Pertea, Corina Antonescu et al. · Nature Biotechnology · 2015 · 15.5K citations · Full text
DEGseq: an R package for identifying differentially expressed genes from RNA-seq data
Likun Wang, Zhixing Feng, Xi Wang et al. · Bioinformatics · 2009 · 4.9K citations · Full text
Full-length RNA-seq from single cells using Smart-seq2
Simone Picelli, Omid R. Faridani, Åsa K. Björklund et al. · Nature Protocols · 2014 · 4.5K citations