mSystems · 2022 · 27 citations · 47 references
Life SciencesEcologyMicrobiologyMetagenomicsMicrobial EcologySoil MicrobiologyEnvironmental MetagenomicsEnvironmental Microbial GenomicsMicrobial Community DynamicsMicrobial Community ProfilingMicrobial DiversityTaxonomic ProfilingComparative Genomics Of Soil MicroorganismsMetagenomic SequencingMicrobial Community DiversityMicrobial Soil EcologyShotgun Metagenomic AnalysisSoil MetagenomicsSoil Microbial Community GenomicsSoil Microbial Genomics
Antarctic soils represent an ideal system to study how environmental properties shape the taxonomic and functional diversity of microbial communities given the relatively low diversity of Antarctic soil microbial communities and the pronounced environmental gradients that occur across soils located in reasonable proximity to one another. Moreover, the challenging environmental conditions typical of most Antarctic soils present an opportunity to investigate the traits that allow soil microbes to persist in some of the most inhospitable habitats on Earth. We used cultivation-independent methods to study the bacterial and archaeal communities found in soil samples collected from across the Shackleton Glacier region of the Transantarctic Mountains. We show that those environmental characteristics associated with elevation have the greatest impact on the structure of these microbial communities, with the colder, drier, and saltier soils found at higher elevations sustaining less diverse communities that were distinct from those in more hospitable soils with respect to their composition, genomic attributes, and overall life-history strategies. Notably, the harsher conditions found in higher-elevation soils likely select for taxa with lower maximum potential growth rates and an increased reliance on trace gas metabolism to support growth.
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R: A Language and Environment for Statistical Computing
R Core Team · 2000 · 353K citations · Full text
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