Journal of Chemical Theory and Computation · 2021 · 47 citations · 77 references
Natural SciencesBiophysicsMolecular BiologyBiomolecular ModelingBiophysical ChemistryComputational ChemistryElectrostatic Interactions In BiomoleculesForce FieldsIntermolecular ForcesMolecular DynamicsNucleic Acid ModelingSolvation ModelingBiomolecular SimulationForce Field OptimizationLennard-jones PotentialMagnesium Coordination In BiomoleculesMolecular Dynamics Simulations Of Nucleic AcidsPolarizable Force FieldsSolvation Free EnergySolvation In Biomolecular Simulations
, or to predict ion binding sites in biomolecular simulations. The parameter files are freely available at https://github.com/bio-phys/optimizedMgFFs.
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Development and testing of a general amber force field
Junmei Wang, Romain M. Wolf, James W. Caldwell et al. · Journal of Computational Chemistry · 2004 · 19.6K citations