Vibrio Clade 3.0: New Vibrionaceae Evolutionary Units Using Genome-Based Approach

MUSCLE: multiple sequence alignment with high accuracy and high throughput

R. C. Edgar · Nucleic Acids Research · 2004 · 45.3K citations · Full text

Genetics, Molecular Biology, Genomics +17

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

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MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

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Comparative Genomics, Genetics, Genomics +18

Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

Bruce J. Walker, Thomas Abeel, Terrance Shea et al. · PLoS ONE · 2014 · 9.7K citations · Full text

Engineering, Genetics, Diploid Genomes +20

Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

Ryan R. Wick, Louise M. Judd, Claire L. Gorrie et al. · PLoS Computational Biology · 2017 · 8.2K citations · Full text

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