Clinical Immunology · 2021 · 42 citations · 25 references
Life SciencesImmunologyMicrobiologyAutoimmunityImmunopathologyInflammationAutoimmune Disease PathogenesisAutoimmune Disease PathologyAutoimmune DiseasesAutoimmune InflammationAutoimmune Rheumatic DiseasesGut MicrobiotaMicrobiome-driven ImmunomodulationMicrobiota EngraftmentMicrobiota-driven Inflammation
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MUSCLE: multiple sequence alignment with high accuracy and high throughput
R. C. Edgar · Nucleic Acids Research · 2004 · 46.5K citations · Full text
UPARSE: highly accurate OTU sequences from microbial amplicon reads
R. C. Edgar · Nature Methods · 2013 · 17.3K citations
FLASH: fast length adjustment of short reads to improve genome assemblies
Tanja Magoč, Steven L. Salzberg · Bioinformatics · 2011 · 15.7K citations · Full text
UCHIME improves sensitivity and speed of chimera detection
R. C. Edgar, Brian J. Haas, José C. Clemente et al. · Bioinformatics · 2011 · 15.5K citations · Full text
Life Sciences, Biology, Microbiology +17
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
Brian J. Haas, Dirk Gevers, Ashlee M. Earl et al. · Genome Research · 2011 · 3.5K citations · Full text
Life Sciences, Biology, Microbiology +13