iScience · 2021 · 14 citations · 42 references
Life SciencesMicrobiologyPharmacologyAntimicrobial PharmacologyMicrobial EcologyMicrobiome ResearchGut MicrobiomeGut MicrobiotaMicrobial Community ProfilingMicrobiome CompositionMicrobiome DiversityMicrobiome FunctionAmoxicillin TherapyAnopheles Mosquito BiologyAnopheles MosquitoesAntibiotic Effects On The Gut MicrobiomeAntibiotic-associated Microbiota ChangesBlood Meal DigestionGut Microbiota CompositionMosquito Microbiome
during blood digestion. Besides its interest on the influence of amoxicillin on the mosquito microbiota, our study proposes a thorough approach to report negative-control data of high-throughput sequencing studies on samples with a reduced microbial load.
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Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
DADA2: High-resolution sample inference from Illumina amplicon data
Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 36.3K citations