Molecular Cell · 2021 · 86 citations · 71 references
MedicineCancer BiologyGeneticsCarcinogenesisNeoplasiaOncogenesCellular SenescenceChromosomal TranslocationsGenome RearrangementOncogene ActivationOncogene-induced SenescenceOncogenic ProliferationCell SenescenceCellular Senescence BypassCellular Senescence GeneticsChromosomal MosaicismOncogene-induced Senescence PathwaysReplicative SenescenceSenescence Bypass Mechanisms
71
The Sequence Alignment/Map format and SAMtools
Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text
Fast and accurate short read alignment with Burrows–Wheeler transform
Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin, Carrie Davis, Felix Schlesinger et al. · Bioinformatics · 2012 · 56.2K citations · Full text
HTSeq—a Python framework to work with high-throughput sequencing data
Simon Anders, Paul Theodor Pyl, Wolfgang Huber · Bioinformatics · 2014 · 22.7K citations · Full text