Concepedia

Transcriptomic analysis of gills in nitrite-tolerant and -sensitive families of Litopenaeus vannamei

Jie Xiao, Shuangshuang Luo, Jing-Hao Du, Qingyun Liu, Yan Huang, Weifeng Wang, Xiuli Chen, Xiaohan Chen, Hong Liu, Xiaoyun Zhou,

Comparative Biochemistry and Physiology Part C Toxicology & Pharmacology · 2021 · 26 citations · 46 references

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46

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

Kenneth J. Livak, Thomas D. Schmittgen · Methods · 2001 · 181.5K citations

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Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love, Wolfgang Huber, Simon Anders · Genome biology · 2014 · 100.5K citations · Full text

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HISAT: a fast spliced aligner with low memory requirements

Daehwan Kim, Ben Langmead, Steven L. Salzberg · Nature Methods · 2015 · 26.1K citations · Full text

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

Cole Trapnell, Brian A. Williams, Geo Pertea et al. · Nature Biotechnology · 2010 · 16.5K citations

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StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

Mihaela Pertea, Geo Pertea, Corina Antonescu et al. · Nature Biotechnology · 2015 · 15.5K citations · Full text

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