A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping

Suhas S.P. Rao, Miriam Huntley, Neva C. Durand, +8

Cell

ChromatinFunctional GenomicsChromatin StructureChromatin RemodelingNatural Sciences +12

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

Erez Lieberman-Aiden, Nynke L. van Berkum, Louise Williams, +16

Science

Structural BioinformaticsGeneticsGenomic MechanismMolecular BiologyGenomics +19

Topological domains in mammalian genomes identified by analysis of chromatin interactions

Jesse R. Dixon, Siddarth Selvaraj, Feng Yue, +6

Nature

ChromatinFunctional GenomicsChromatin StructureChromatin RemodelingChromatin Interactions +13

Protein secondary structure prediction based on position-specific scoring matrices 1 1Edited by G. Von Heijne

David T. Jones

Journal of Molecular Biology

Structural BioinformaticsBiomolecular Structure PredictionProtein FoldingMedicineNatural Sciences +10

Histone H3K27ac separates active from poised enhancers and predicts developmental state

Menno P. Creyghton, Albert W. Cheng, G. Grant Welstead, +10

Proceedings of the National Academy of Sciences

Histone ModificationsEpigenetic ChangeGeneticsEpigeneticsDevelopmental Programs +18

Selective inhibition of BET bromodomains

P. Filippakopoulos, Jun Qi, S. Picaud, +22

Nature

Bet BromodomainsGeneticsPathogenesisMolecular GeneticsMedicine +1

Super-Enhancers in the Control of Cell Identity and Disease

Denes Hnisz, Brian J. Abraham, Tong Ihn Lee, +5

Cell

Cell RegulationAutoimmunityCell IdentityMedicineCell Biology +2

A global double‐fluorescent Cre reporter mouse

Mandar D. Muzumdar, Bosiljka Tasic, Kazunari Miyamichi, +2

genesis

Spatial partitioning of the regulatory landscape of the X-inactivation centre

Elphège P. Nora, Bryan R. Lajoie, Edda G. Schulz, +12

Nature

BiologySystems BiologyDevelopmental BiologyCell DivisionSpatial Partitioning +5

HiC-Pro: an optimized and flexible pipeline for Hi-C data processing

Nicolas Servant, Nelle Varoquaux, Bryan R. Lajoie, +6

Genome biology

EngineeringGeneticsComputer ArchitectureGenomicsHic-pro Maps Reads +21