Archives of Microbiology · 2021 · 21 citations · 25 references
Life SciencesGeneticsMicrobiologyBacteriologyGenomicsMicrobial GenomicsBacterial MetabolismLactic Acid BacteriaMicrobial Genome StructureProbiotic ProductionProbioticsProbiotics In FoodsAcid Tolerance Of BacteriaAcid Tolerance ResponseGenomic Characterization Of ProbioticsOrganic Acid ToleranceProbiotic MicroorganismsProbiotic PropertiesTolerance Mechanism Elucidation
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Prokka: rapid prokaryotic genome annotation
Torsten Seemann · Bioinformatics · 2014 · 19.6K citations
The RAST Server: Rapid Annotations using Subsystems Technology
Ramy K. Aziz, Daniela Bartels, Aaron A. Best et al. · BMC Genomics · 2008 · 11.8K citations · Full text
Roary: rapid large-scale prokaryote pan genome analysis
Andrew J. Page, Carla Cummins, Martin Hunt et al. · Bioinformatics · 2015 · 5.9K citations · Full text
BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons
Nabil-Fareed Alikhan, Nicola K. Petty, Nouri L. Ben Zakour et al. · BMC Genomics · 2011 · 3.4K citations · Full text