PLoS ONE · 2021 · 21 citations · 72 references
Public HealthInfectious Disease ControlInfectious DiseasesEpidemiologyOutbreak InvestigationStochastic ProcessesDisease Progression ModelingEpidemic ForecastingInfectious Disease DynamicsTime-series Analysis In EpidemiologyDiscrete-time Epidemic ModelsDiscrete-time ModelsDynamic ProcessesEpidemic ModelsExponential GrowthGrowth Curve ModelsSelf-exciting ProcessesStochastic Epidemic Models
Hawkes processes are a form of self-exciting process that has been used in numerous applications, including neuroscience, seismology, and terrorism. While these self-exciting processes have a simple formulation, they can model incredibly complex phenomena. Traditionally Hawkes processes are a continuous-time process, however we enable these models to be applied to a wider range of problems by considering a discrete-time variant of Hawkes processes. We illustrate this through the novel coronavirus disease (COVID-19) as a substantive case study. While alternative models, such as compartmental and growth curve models, have been widely applied to the COVID-19 epidemic, the use of discrete-time Hawkes processes allows us to gain alternative insights. This paper evaluates the capability of discrete-time Hawkes processes by modelling daily mortality counts as distinct phases in the COVID-19 outbreak. We first consider the initial stage of exponential growth and the subsequent decline as preventative measures become effective. We then explore subsequent phases with more recent data. Various countries that have been adversely affected by the epidemic are considered, namely, Brazil, China, France, Germany, India, Italy, Spain, Sweden, the United Kingdom and the United States. These countries are all unique concerning the spread of the virus and their corresponding response measures. However, we find that this simple model is useful in accurately capturing the dynamics of the process, despite hidden interactions that are not directly modelled due to their complexity, and differences both within and between countries. The utility of this model is not confined to the current COVID-19 epidemic, rather this model could explain many other complex phenomena. It is of interest to have simple models that adequately describe these complex processes with unknown dynamics. As models become more complex, a simpler representation of the process can be desirable for the sake of parsimony.
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Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe
Seth Flaxman, Swapnil Mishra, Axel Gandy et al. · Nature · 2020 · 3.8K citations · Full text
Public Health, Infectious Disease Control, Infectious Diseases +11
Kiesha Prem, Yang Liu, Timothy Russell et al. · The Lancet Public Health · 2020 · 2.3K citations · Full text
Veterinary Medicine, Infectious Disease Control, Infectious Diseases +17
Spectra of some self-exciting and mutually exciting point processes
Alan G. Hawkes · Biometrika · 1971 · 2.2K citations