Concepedia

Urinary Single-Cell Profiling Captures the Cellular Diversity of the Kidney

Amin Abedini, Yuan Zhu, Shatakshee Chatterjee, Gábor Halász, Kishor Devalaraja‐Narashimha, Rojesh Shrestha, Michael S. Balzer, Jihwan Park, Tong Zhou, Ziyuan Ma,

Journal of the American Society of Nephrology · 2021 · 106 citations · 26 references

Open access

Abstract

A reference dataset for cells in human urine was generated. Single-cell transcriptomics enables detection and quantification of almost all types of cells in the kidney and urinary tract.

References

26

Comprehensive Integration of Single-Cell Data

Tim Stuart, Andrew Butler, Paul Hoffman et al. · Cell · 2019 · 16K citations · Full text

Engineering, Biomedical Data Integration, Data Science +11

Integrating single-cell transcriptomic data across different conditions, technologies, and species

Andrew Butler, Paul Hoffman, Peter Smibert et al. · Nature Biotechnology · 2018 · 14.1K citations · Full text

Engineering, Genetics, Multiomics +17

Fast, sensitive and accurate integration of single-cell data with Harmony

Ilya Korsunsky, Nghia Millard, Jean Fan et al. · Nature Methods · 2019 · 9.5K citations · Full text

Bioinformatics, Engineering, Data Science +14

DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest Neighbors

Christopher S. McGinnis, Lyndsay M. Murrow, Zev J. Gartner · Cell Systems · 2019 · 4.2K citations · Full text

Doublet Detection, Functional Genomics, Sequencing +15

SoupX removes ambient RNA contamination from droplet-based single-cell RNA sequencing data

Matthew D. Young, Sam Behjati · GigaScience · 2020 · 1.5K citations · Full text