Concepedia

Deep learning embedder method and tool for mass spectra similarity search

Chunyuan Qin, Xiyang Luo, Chuan Deng, Kunxian Shu, Weimin Zhu, Johannes Griss, Henning Hermjakob, Mingze Bai, Yasset Pérez‐Riverol

Journal of Proteomics · 2020 · 21 citations · 32 references

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32

PyTorch: An Imperative Style, High-Performance Deep Learning Library

Adam Paszke, Sam Gross, Francisco Massa et al. · arXiv (Cornell University) · 2019 · 16.2K citations · Full text

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MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

Jürgen Cox, Matthias Mann · Nature Biotechnology · 2008 · 15.7K citations

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Probability-based protein identification by searching sequence databases using mass spectrometry data

David N. Perkins, Darryl Pappin, David M. Creasy et al. · Electrophoresis · 1999 · 8.3K citations

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Using AUC and accuracy in evaluating learning algorithms

Jin Huang, Charles X. Ling · IEEE Transactions on Knowledge and Data Engineering · 2005 · 2.1K citations

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MS-GF+ makes progress towards a universal database search tool for proteomics

Sangtae Kim, Pavel A. Pevzner · Nature Communications · 2014 · 1.2K citations · Full text

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