Host variables confound gut microbiota studies of human disease

DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 33.5K citations · Full text

Illumina Amplicon Data, Omics Datasets, Spectral Searching +5

Structure, function and diversity of the healthy human microbiome

Curtis Huttenhower, Lucia Alvarado, Sandra L. Lee · Nature · 2012 · 11.6K citations · Full text

Microbiota Structure, Dysbiosis, Healthy Human Microbiome +7

A metagenome-wide association study of gut microbiota in type 2 diabetes

Junjie Qin, Yingrui Li, Zhiming Cai et al. · Nature · 2012 · 6.7K citations · Full text

Dysbiosis, Microbiota, Diabetes +11

Microbiota Modulate Behavioral and Physiological Abnormalities Associated with Neurodevelopmental Disorders

Elaine Y. Hsiao, Sara W. McBride, Sophia Hsien et al. · Cell · 2013 · 3.2K citations · Full text

Neurodevelopmental Disorders, Neurobiological Mechanism, Psychiatry +11

The Treatment-Naive Microbiome in New-Onset Crohn’s Disease

Dirk Gevers, Subra Kugathasan, Lee A. Denson et al. · Cell Host & Microbe · 2014 · 3.2K citations · Full text

Chronic Inflammatory Diseases, Dysbiosis, Mucosal Immunology +7