Concepedia

Diversity of L1/L2 genes and molecular epidemiology of high-level carbapenem resistance Stenotrophomonas maltophilia isolates from animal production environment in China

Lu Han, Rong‐Min Zhang, Ling Jia, Shuan-Cheng Bai, Xuwei Liu, Ran Wei, Chao‐Yue Cui, Ruan-Yang Sun, Min-Ge Wang, Da-Tong Cai,

Infection Genetics and Evolution · 2020 · 21 citations · 27 references

DOI

Concepts

References

27

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

Sudhir Kumar, Glen Stecher, Koichiro Tamura · Molecular Biology and Evolution · 2016 · 44.6K citations · Full text

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Anton Bankevich, Sergey Nurk, Dmitry Antipov et al. · Journal of Computational Biology · 2012 · 25.9K citations · Full text

High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries

Chirag Jain, Luis M. Rodriguez‐R, Adam M. Phillippy et al. · Nature Communications · 2018 · 5.2K citations · Full text

Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes

Mincheol Kim, Hyun‐Seok Oh, Sang‐Cheol Park et al. · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2014 · 3K citations

, , +20

The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes

Todd J. Treangen, Brian Ondov, Sergey Koren et al. · Genome biology · 2014 · 1.6K citations · Full text