eLife · 2020 · 96 citations · 78 references
Life SciencesCell BiologyMolecular BiologyGene ExpressionMolecular Cell BiologyProtein TranslationHeat StressHeat Stress ToleranceProtein SynthesisStress Response GenesStress-responsive Gene RegulationTranscriptional Regulation In EukaryotesCellular Heat Shock ResponseHeat Shock FactorsHeat Shock Protein RegulationHeat Shock ResponseHeat Shock Response GenesReentry MechanismsRegulation By Heat Shock ProteinsTranslation Control Under Heat Stress
Heat shock induces a conserved transcriptional program regulated by heat shock factor 1 (Hsf1) in eukaryotic cells. Activation of this heat shock response is triggered by heat-induced misfolding of newly synthesized polypeptides, and so has been thought to depend on ongoing protein synthesis. Here, using the budding yeast Saccharomyces cerevisiae , we report the discovery that Hsf1 can be robustly activated when protein synthesis is inhibited, so long as cells undergo cytosolic acidification. Heat shock has long been known to cause transient intracellular acidification which, for reasons which have remained unclear, is associated with increased stress resistance in eukaryotes. We demonstrate that acidification is required for heat shock response induction in translationally inhibited cells, and specifically affects Hsf1 activation. Physiological heat-triggered acidification also increases population fitness and promotes cell cycle reentry following heat shock. Our results uncover a previously unknown adaptive dimension of the well-studied eukaryotic heat shock response.
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R: A Language and Environment for Statistical Computing
R Core Team · 2000 · 353K citations · Full text
Natural Sciences, Computer Science, Statistical Computing +10
Near-optimal probabilistic RNA-seq quantification
Nicolas Bray, Harold Pimentel, Páll Melsted et al. · Nature Biotechnology · 2016 · 11K citations · Full text