Concepedia

A chromosome-level genome assembly of the wild rice Oryza rufipogon facilitates tracing the origins of Asian cultivated rice

Xianrong Xie, Huilong Du, Huiwu Tang, Jianian Tang, Xiyu Tan, Weizhi Liu, Tie Li, Zhansheng Lin, Chengzhi Liang, Yao‐Guang Liu

Science China Life Sciences · 2020 · 40 citations · 90 references

DOI

Concepts

References

90

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 64.7K citations · Full text

Fast and accurate short read alignment with Burrows–Wheeler transform

Heng Li, Richard Durbin · Bioinformatics · 2009 · 60.7K citations · Full text

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 58.3K citations · Full text

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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

Sudhir Kumar, Glen Stecher, Koichiro Tamura · Molecular Biology and Evolution · 2016 · 44.6K citations · Full text

PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage Analyses

Shaun Purcell, Benjamin M. Neale, Katherine EO Todd-Brown et al. · The American Journal of Human Genetics · 2007 · 34.9K citations · Full text

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