Genome-wide association study leads to novel genetic insights into resistance to Aspergillus flavus in maize kernels

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 66.2K citations · Full text

TASSEL: software for association mapping of complex traits in diverse samples

Peter J. Bradbury, Zhiwu Zhang, Dallas E. Kroon et al. · Bioinformatics · 2007 · 7.9K citations · Full text

Phenotypic Variation, Association Mapping, Genetics +26

Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown

Mihaela Pertea, Daehwan Kim, Geo Pertea et al. · Nature Protocols · 2016 · 7.3K citations · Full text

Functional Genomics, Natural Sciences, Genetics +10

The Pfam protein families database in 2019

Sara El-Gebali, Jaina Mistry, Alex Bateman et al. · Nucleic Acids Research · 2018 · 4.9K citations · Full text

Genetics, Tandem Repeat Families, Molecular Biology +17

The B73 Maize Genome: Complexity, Diversity, and Dynamics

Patrick S. Schnable, Doreen Ware, Robert S. Fulton et al. · Science · 2009 · 4.1K citations