Journal of Agricultural and Food Chemistry · 2020 · 18 citations · 41 references
EntomologyGlycobiologyChemical ControlMolecular BiologyVicilin ChitinChemical BiologyToxicologyInsecticideChitin-binding AffinityBiochemistryChitin Binding SitesChemical ModificationsVicilin Chitin BindingPharmacologyNatural SciencesInduced ResistanceSeed StorageVicilins InterfereMedicineCarbohydrate-protein Interaction
Vicilins are related to cowpea seed resistance toward Callosobruchus maculatus due to their ability to bind to chitinous structures lining larval midgut. However, this binding mechanism is not fully understood. Here, we identified chitin binding sites and investigated how in vitro and in silico chemical modifications interfere with vicilin chitin binding and insect toxicity. In vitro assays showed that unmodified vicilin strongly binds to chitin matrices, mainly with acetylated chitin. Chemical modifications of specific amino acids (tryptophan, lysine, tyrosine), as well as glutaraldehyde cross-linking, decreased the evaluated parameters. In silico analyses identified at least one chitin binding site in vicilin monomer, the region between Arg208 and Lys216, which bears the sequence REGIRELMK and forms an α helix, exposed in the 3D structure. In silico modifications of Lys223 (acetylated at its terminal nitrogen) and Trp316 (iodinated to 7-iodine-L-tryptophan or oxidized to β-oxy-indolylalanine) decreased vicilin chitin binding affinity. Glucose, sucrose, and N-acetylglucosamine also interfered with vicilin chitin binding affinity.
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Chitin and chitosan: Properties and applications
Marguerite Rinaudo · Progress in Polymer Science · 2006 · 7.8K citations
Structure validation by Cα geometry: ϕ,ψ and Cβ deviation
Simon C. Lovell, Ian Davis, W.B. Arendall et al. · Proteins Structure Function and Bioinformatics · 2003 · 4.6K citations