Nature · 2020 · 536 citations · 45 references
Life SciencesCell BiologyImmunologyCell SignalingRheumatologySignal TransductionInflammatory ProcessesJoint DiseaseJoint PathologyNotch SignalingRheumatoid ArthritisSynovial InflammationChronic Synovial InflammationInflammatory Synovial PathologyNotch Receptor SignalingNotch Signaling ComplexesSynovial Fibroblasts
45
Fast, sensitive and accurate integration of single-cell data with Harmony
Ilya Korsunsky, Nghia Millard, Jean Fan et al. · Nature Methods · 2019 · 10.5K citations · Full text
UMAP: Uniform Manifold Approximation and Projection
Leland McInnes, John Healy, Nathaniel Saul et al. · The Journal of Open Source Software · 2018 · 9.6K citations · Full text
Reversed graph embedding resolves complex single-cell trajectories
Xiaojie Qiu, Qi Mao, Ying Tang et al. · Nature Methods · 2017 · 5.4K citations · Full text
From Louvain to Leiden: guaranteeing well-connected communities
Nees Jan van Eck · Scientific Reports · 2019 · 5.2K citations · Full text
Full-length RNA-seq from single cells using Smart-seq2
Simone Picelli, Omid R. Faridani, Åsa K. Björklund et al. · Nature Protocols · 2014 · 4.5K citations