Scientific Reports · 2020 · 13 citations · 36 references
Life SciencesBioinformaticsOral BiologyCell SignalingDrug DiscoveryPathway AnalysisChemokine NetworksOral Potentially Malignant DisordersCxcl12-cxcr4 SignalingG Protein-coupled Chemokine Receptors
Today, we face difficulty in generating new hypotheses and understanding oral lichen planus due to the large amount of biomedical information available. In this research, we have used an integrated bioinformatics approach assimilating information from data mining, gene ontologies, protein-protein interaction and network analysis to predict candidate genes related to oral lichen planus. A detailed pathway analysis led us to propose two promising therapeutic targets: the stromal cell derived factor 1 (CXCL12) and the C-X-C type 4 chemokine receptor (CXCR4). We further validated our predictions and found that CXCR4 was upregulated in all oral lichen planus tissue samples. Our bioinformatics data cumulatively support the pathological role of chemokines and chemokine receptors in oral lichen planus. From a clinical perspective, we suggest a drug (plerixafor) and two therapeutic targets for future research.
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Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
Paul Shannon, Andrew Markiel, Owen Ozier et al. · Genome Research · 2003 · 54.3K citations · Full text
World Medical Association Declaration of Helsinki
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Interleukin-8 as a Macrophage-Derived Mediator of Angiogenesis
Alisa E. Koch, Peter J. Polverini, Steven L. Kunkel et al. · Science · 1992 · 2.1K citations