Organic Letters · 2020 · 21 citations · 19 references
Life SciencesMicrobiologyMolecular BiologyMicrobial GeneticsNatural Product BiosynthesisSynthetic BiologyBacterial SporesMarine Natural Product BiosynthesisMicrobial Natural Product BiosynthesisMicrobial Synthetic BiologyPolyketide BiosynthesisBiosynthetic Gene Cluster AnalysisGenome MiningGenome Mining For Natural ProductsLabelingMicrobial Genome-encoded BiosynthesisPolyketide Synthase Gene ClustersPolyketide Synthase PathwaysSpirocyclic Scaffolds
Growth from spores activated a biosynthetic gene cluster in Actinomadura sp. RB29, resulting in the identification of two novel groups of halogenated polyketide natural products, named maduralactomycins and actinospirols. The unique tetracyclic and spirocyclic structures were assigned based on a combination of NMR analysis, chemoinformatic calculations, X-ray crystallography, and 13C labeling studies. On the basis of HRMS2 data, genome mining, and gene expression studies, we propose an underlying noncanonical angucycline biosynthesis and extensive post-polyketide synthase (PKS) oxidative modifications.
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antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
Kai Blin, Simon J. Shaw, Kat Steinke et al. · Nucleic Acids Research · 2019 · 3.1K citations · Full text
MIBiG 2.0: a repository for biosynthetic gene clusters of known function
Satria A. Kautsar, Kai Blin, Simon J. Shaw et al. · Nucleic Acids Research · 2019 · 620 citations · Full text
A genetics-free method for high-throughput discovery of cryptic microbial metabolites
Fei Xu, Yihan Wu, Chen Zhang et al. · Nature Chemical Biology · 2018 · 189 citations