Nature Communications · 2020 · 144 citations · 42 references
Life SciencesMarine BiologyMicrobiologyMarine EcologyMarine MicrobiologyMicrobial EcologyAntimicrobial PeptidesBacterial Secretion SystemsGlycan BiosynthesisMarine BacteriologyMarine Microbial PhysiologyMicrobial BiogeochemistryBacterial Glycan BiosynthesisMarine Bacterial EnzymesPeptidoglycan BiosynthesisPeptidoglycan DegradationPredator - Prey DynamicsPredator-prey RelationshipsPrey-predator CoevolutionType Ii Secretion System
Predator-prey interactions play important roles in the cycling of marine organic matter. Here we show that a Gram-negative bacterium isolated from marine sediments (Pseudoalteromonas sp. strain CF6-2) can kill Gram-positive bacteria of diverse peptidoglycan (PG) chemotypes by secreting the metalloprotease pseudoalterin. Secretion of the enzyme requires a Type II secretion system. Pseudoalterin binds to the glycan strands of Gram positive bacterial PG and degrades the PG peptide chains, leading to cell death. The released nutrients, including PG-derived D-amino acids, can then be utilized by strain CF6-2 for growth. Pseudoalterin synthesis is induced by PG degradation products such as glycine and glycine-rich oligopeptides. Genes encoding putative pseudoalterin-like proteins are found in many other marine bacteria. This study reveals a new microbial interaction in the ocean.
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Interactive metagenomic visualization in a Web browser
Brian Ondov, Nicholas H. Bergman, Adam M. Phillippy · BMC Bioinformatics · 2011 · 2.2K citations · Full text
Computing, Biology, Visualization +13