Concepedia

Contrasting grapevines grafted into naturalized rootstock suggest scion-driven transcriptomic changes in response to water deficit

Nicolás Franck, Denisse Zamorano, Britt N. Wallberg, Charlotte Hardy, Mario Ahumada, Natalia Rivera, María Montoya, Claudio Urra, Claudio Meneses, Iván Balic,

Scientia Horticulturae · 2019 · 15 citations · 48 references

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48

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 64.7K citations · Full text

STAR: ultrafast universal RNA-seq aligner

Alexander Dobin, Carrie Davis, Felix Schlesinger et al. · Bioinformatics · 2012 · 53.2K citations · Full text

<tt>edgeR</tt> : a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson, Davis J. McCarthy, Gordon K. Smyth · Bioinformatics · 2009 · 42.7K citations · Full text

HTSeq—a Python framework to work with high-throughput sequencing data

Simon Anders, Paul Theodor Pyl, Wolfgang Huber · Bioinformatics · 2014 · 21.9K citations · Full text

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

Nature · 2007 · 3.8K citations · Full text