Concepedia

Preventing dysbiosis of the neonatal mouse intestinal microbiome protects against late-onset sepsis

Jeffrey R. Singer, Emily G. Blosser, Carlene L. Zindl, Daniel J. Silberger, Sean Conlan, Vincent A. Laufer, Daniel DiToro, Clay Deming, Ranjit Kumar, Casey D. Morrow,

Nature Medicine · 2019 · 141 citations · 62 references

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62

Fitting Linear Mixed-Effects Models Using <b>lme4</b>

Douglas M. Bates, Martin Mächler, Benjamin M. Bolker et al. · Journal of Statistical Software · 2015 · 85.6K citations · Full text

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Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

, , +11

Metagenomic biomarker discovery and explanation

Nicola Segata, Jacques Izard, Levi Waldron et al. · Genome biology · 2011 · 16.7K citations · Full text

, , +10

Canu: scalable and accurate long-read assembly via adaptive <i>k</i> -mer weighting and repeat separation

Sergey Koren, Brian P. Walenz, Konstantin Berlin et al. · Genome Research · 2017 · 8.2K citations · Full text

, , +16

Kraken: ultrafast metagenomic sequence classification using exact alignments

Derrick E. Wood, Steven L. Salzberg · Genome biology · 2014 · 4.9K citations · Full text

, , +17