Journal of Experimental Botany · 2019 · 15 citations · 71 references
Life SciencesPlant BiologyPlant SciencesPlant BiochemistryPlant Molecular BiologyPlant PhysiologyCold Stress PhysiologyPlant EnzymesPlant ProteomicsPlant Transcriptional RegulationStress BiochemistryTemperature PhysiologyCell-type-specific ProteomicsEnzymatic AntioxidantsLeaf Growth RegulationNon-enzymatic AntioxidantsPlant Cold Stress PhysiologyPlant Protein ProfilingProteome AnnotationRedox Homeostasis
We analysed the cellular and molecular changes in the leaf growth zone of tolerant and sensitive rice varieties in response to suboptimal temperatures. Cold reduced the final leaf length by 35% and 51% in tolerant and sensitive varieties, respectively. Tolerant lines exhibited a smaller reduction of the leaf elongation rate and greater compensation by an increased duration of leaf growth. Kinematic analysis showed that cold reduced cell production in the meristem and the expansion rate in the elongation zone, but the latter was compensated for by a doubling of the duration of cell expansion. We performed iTRAQ proteome analysis on proliferating and expanding parts of the leaf growth zone. We identified 559 and 542 proteins, of which 163 and 210 were differentially expressed between zones, and 96 and 68 between treatments, in the tolerant and sensitive lines, respectively. The categories protein biosynthesis and redox homeostasis were significantly overrepresented in the up-regulated proteins. We therefore measured redox metabolites and enzyme activities in the leaf growth zone, demonstrating that tolerance of rice lines to suboptimal temperatures correlates with the ability to up-regulate enzymatic antioxidants in the meristem and non-enzymatic antioxidants in the elongation zone.
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H. Aebi · Methods in enzymology on CD-ROM/Methods in enzymology · 1984 · 25.1K citations
The Perseus computational platform for comprehensive analysis of (prote)omics data
Stefka Tyanova, Tikira Temu, Pavel Sinitcyn et al. · Nature Methods · 2016 · 8.9K citations