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Profiles of the bacterial community in short-term indwelling urinary catheters by duration of catheterization and subsequent urinary tract infection

Jyothi Manohar, Savannah Hatt, Brigette B. DeMarzo, Freida Blostein, Anna E. W. Cronenwett, Jianfeng Wu, Kyu Han Lee, Betsy Foxman

American Journal of Infection Control · 2019 · 10 citations · 28 references

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28

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

James J. Kozich, Sarah L. Westcott, Nielson T. Baxter et al. · Applied and Environmental Microbiology · 2013 · 7.5K citations · Full text

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Multistate Point-Prevalence Survey of Health Care–Associated Infections

Shelley S. Magill, Jonathan R. Edwards, Wendy Bamberg et al. · New England Journal of Medicine · 2014 · 3.9K citations · Full text

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Development of an extensive set of 16S rDNA-targeted primers for quantification of pathogenic and indigenous bacteria in faecal samples by real-time PCR

Teemu Rinttilä, Anna Kassinen, Erja Malinen et al. · Journal of Applied Microbiology · 2004 · 1K citations

, , +9

Dirichlet Multinomial Mixtures: Generative Models for Microbial Metagenomics

Ian Holmes, Keith Harris, Christopher Quince · PLoS ONE · 2012 · 950 citations · Full text

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ANOVA-Like Differential Expression (ALDEx) Analysis for Mixed Population RNA-Seq

Andrew D. Fernandes, Jean M. Macklaim, Thomas Linn et al. · PLoS ONE · 2013 · 933 citations · Full text

, , +12