Proceedings of the National Academy of Sciences · 2019 · 93 citations · 93 references
Life SciencesBiochemistryMolecular BiologyEnzymologyProtein-protein InteractionsProteomicsProtein DegradationProteolytic EnzymesYeast GeneticsProteasome SystemProtein Degradation PathwaysProteolytic PathwaysSequence Recognition MotifsSubstrate Recognition In Ubiquitin PathwaysUbiquitin System
grows on a nonfermentable carbon source, its gluconeogenic enzymes Fbp1, Icl1, Mdh2, and Pck1 are expressed and long-lived. Transition to a medium containing glucose inhibits the synthesis of these enzymes and induces their degradation by the Gid4-dependent Pro/N-degron pathway. While studying yeast Gid4, we identified a similar but uncharacterized yeast protein (YGR066C), which we named Gid10. A screen for N-terminal peptide sequences that can bind to Gid10 showed that substrate specificities of Gid10 and Gid4 overlap but are not identical. Gid10 is not expressed under usual (unstressful) growth conditions, but is induced upon starvation or osmotic stresses. Using protein binding analyses and degradation assays with substrates of GID, we show that Gid10 can function as a specific N-recognin of the Pro/N-degron pathway.
93
Phylogeny.fr: robust phylogenetic analysis for the non-specialist
Alexis Dereeper, Valentin Guignon, Guillaume Blanc et al. · Nucleic Acids Research · 2008 · 4.8K citations · Full text