Toxins · 2019 · 54 citations · 77 references
Life SciencesGeneticsMicrobiologyComparative MicrobiologyFood MicrobiologyMicrobial GeneticsMicrobial Food SafetyMicrobiological Food SafetyPlasmid BiologyPlasmid GeneticsPlasmid GenomicsPlasmid-mediated ResistanceBacterial Acid TolerancePlasmid ClassificationPlasmid Comparative GenomicsPlasmid EvolutionPlasmid LibrariesPlasmid ProfilingQuantitative Pcr DetectionSalt Stress Responses
Listeria monocytogenes strains are known to harbour plasmids that confer resistance to sanitizers, heavy metals, and antibiotics; however, very little research has been conducted into how plasmids may influence L. monocytogenes’ ability to tolerate food-related stresses. To investigate this, a library (n = 93) of L. monocytogenes plasmid sequences were compared. Plasmid sequences were divided into two groups (G1 and G2) based on a repA phylogeny. Twenty-six unique plasmid types were observed, with 13 belonging to each of the two repA-based groups. G1 plasmids were significantly (p < 0.05) smaller than G2 plasmids but contained a larger diversity of genes. The most prevalent G1 plasmid (57,083 bp) was observed in 26 strains from both Switzerland and Canada and a variety of serotypes. Quantitative PCR (qPCR) revealed a >2-fold induction of plasmid-contained genes encoding an NADH peroxidase, cadmium ATPase, multicopper oxidase, and a ClpL chaperone protein during growth under salt (6% NaCl) and acid conditions (pH 5) and ProW, an osmolyte transporter, under salt stress conditions. No differences in salt and acid tolerance were observed between plasmid-cured and wildtype strains. This work highlights the abundance of specific plasmid types among food-related L. monocytogenes strains, the unique characteristics of G1 and G2 plasmids, and the possible contributions of plasmids to L. monocytogenes tolerance to food-related stresses.
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Mutation of the mouse klotho gene leads to a syndrome resembling ageing.
PubMed · 1997 · 66.6K citations
The RAST Server: Rapid Annotations using Subsystems Technology
Ramy K. Aziz, Daniela Bartels, Aaron A. Best et al. · BMC Genomics · 2008 · 11.8K citations · Full text
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)
Ross Overbeek, Robert Olson, Gordon D. Pusch et al. · Nucleic Acids Research · 2013 · 4.6K citations · Full text