Concepedia

Joint analysis of heterogeneous single-cell RNA-seq dataset collections

Nikolaos Barkas, Viktor Petukhov, Daria Nikolaeva, Yaroslav Lozinsky, Samuel Demharter, Konstantin Khodosevich, Peter V. Kharchenko

Nature Methods · 2019 · 343 citations · 22 references

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22

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love, Wolfgang Huber, Simon Anders · Genome biology · 2014 · 100.5K citations · Full text

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limma powers differential expression analyses for RNA-sequencing and microarray studies

Matthew E. Ritchie, Belinda Phipson, Di Wu et al. · Nucleic Acids Research · 2015 · 43K citations · Full text

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Integrating single-cell transcriptomic data across different conditions, technologies, and species

Andrew Butler, Paul Hoffman, Peter Smibert et al. · Nature Biotechnology · 2018 · 14.7K citations · Full text

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Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris

Nature · 2018 · 3.2K citations · Full text

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Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors

Laleh Haghverdi, Aaron T. L. Lun, Michael D. Morgan et al. · Nature Biotechnology · 2018 · 2.7K citations · Full text

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