Archives of Virology · 2019 · 21 citations · 16 references
Life SciencesGeneticsMicrobiologyGenomicsMicrobial GeneticsVirologyPathogen GenomicsViral GeneticsViral Genome OrganizationViral GenomicsVirus EvolutionVirus Genome OrganizationFungal VirologyMolecular Virus SystematicsNovel Virus IdentificationPathogen Genome AssemblyWhole-genome Sequence Analysis
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Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
Sudhir Kumar, Glen Stecher, Michael Li et al. · Molecular Biology and Evolution · 2018 · 38.8K citations · Full text
Full-length transcriptome assembly from RNA-Seq data without a reference genome
Manfred Grabherr, Brian J. Haas, Moran Yassour et al. · Nature Biotechnology · 2011 · 22.6K citations · Full text