The Journal of Chemical Physics · 2019 · 27 citations · 88 references
Protein ChemistryHydrated Protein PowdersHydrated WaterBiochemistryProtein FoldingNatural SciencesBiophysical AspectHydrogen-bonded LiquidProtein EngineeringProtein Phase SeparationProtein RefoldingMedicineBiophysicsBulk WaterHydration Water
It is not an understatement to say that the interplay between water and protein is a fundamental aspect of life. The vitality of an organism depends on the functionality of its biological machinery, and this, in turn, is mediated in water. Yet, we understand surprisingly little about the nature of the interface between bulk water and the protein. On the one hand, we know that the nature of the bulk water is dominated by the existence of H-bonding and H-bonded networks. On the other hand, the protein surface, where much of the bioactivity is centered, is a complex landscape of hydrophilic and hydrophobic elements. So how does the interface between these two entities work and how do they influence each other? The question is important because if one understands how a particular protein interface influences the dynamics of the water, it then becomes an easily accessible marker for similar behavior in other protein systems. The dielectric relaxation of hydrated proteins with different structures, lysozyme, collagen, and phycocyanin, has been reviewed in this paper. The dynamics of hydrated water was analyzed in terms of orientation and the ionic defect migration model. This approach enables to characterize the microscopic relaxation mechanism of the dynamics of hydration water on the different structures of the protein. In addition, our model is also capable of characterizing not only hydrated proteins but also polymer-water systems.
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Noam Agmon · Chemical Physics Letters · 1995 · 3.3K citations
The nature of the hydrated excess proton in water
Dominik Marx, Mark E. Tuckerman, Jürg Hutter et al. · Nature · 1999 · 1.9K citations
Proton Transfer, Proton-coupled Electron Transfer, Hydrogen +1
A unified model of protein dynamics
Hans Frauenfelder, Guo Chen, Joel Berendzen et al. · Proceedings of the National Academy of Sciences · 2009 · 747 citations · Full text