Ecosphere · 2019 · 44 citations · 39 references
Life SciencesEcologySoil SciencesMicrobial EcologySoil MicrobiologySoil ScienceForest BiodiversityFungal DiversityMicrobial DiversitySoil BiodiversitySpecies DiversityTaxonomic DiversityAlpha DiversityAmplicon SequencingBeta DiversityForest PlantationsMicrobial Community DiversitySoil Alpha DiversitySoil Bacterial DiversitySoil Fauna Diversity
Abstract Trees provide organic substrates in the form of root exudates, litterfall, and fine root turnover. They modify soil physical properties and support soil biological activities. Therefore, trees are hypothesized to control soil biodiversity in forested areas. We predicted that (1) experimental forest plantations with higher tree alpha‐diversity have greater soil microbial alpha‐diversity and (2) that plantations with more divergent tree community composition would have more divergent soil microbial assemblages (Whitaker's beta‐diversity). We tested these predictions by measuring soil bacteria and fungi in a 7‐yr‐old tree biodiversity experiment. The experimental plantation contained 37 different tree assemblages, which were composed of one to four native species from temperate mixed deciduous forests. Further, there was a gradient of functional diversity nested within each level of species diversity. Soil samples were assessed for bacteria and fungi by amplicon sequencing. Tree alpha‐diversity weakly, but significantly, affected bacterial alpha‐diversity, without affecting fungal alpha‐diversity. Tree community composition was weakly, but significantly, linked to soil bacterial and fungal assemblages. In these 7‐yr‐old experimental plantations, tree diversity was not the most influential driver of soil microbial diversity.
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R: A Language and Environment for Statistical Computing
R Core Team · 2000 · 353K citations · Full text
Natural Sciences, Computer Science, Statistical Computing +10
DADA2: High-resolution sample inference from Illumina amplicon data
Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 36.3K citations
An Ordination of the Upland Forest Communities of Southern Wisconsin
J. R. Bray, J. T. Curtis · Ecological Monographs · 1957 · 11.7K citations
Natural Resources, Ecology, Forestry +14