The Journal of Experimental Medicine · 2019 · 191 citations · 59 references
Life SciencesImmunologyMolecular BiologyAutoimmunityImmunoregulationSignal TransductionB Cell ActivationB Cell BiologyB Cell Receptor SignalingB-cell ResponsesCytokine BiologyRegulation Of AutoimmunityGlucocorticoid ImmunoregulationGlucocorticoid ImmunosuppressionGlucocorticoid Mechanism Of ActionGlucocorticoid SignalingGlucocorticoid-mediated Immune ModulationImmunoglobulin Gene LociImmunomodulatory CytokinesImmunosuppressive Effects Of Corticosteroids
Glucocorticoids remain the most widely used immunosuppressive and anti-inflammatory drugs, yet substantial gaps exist in our understanding of glucocorticoid-mediated immunoregulation. To address this, we generated a pathway-level map of the transcriptional effects of glucocorticoids on nine primary human cell types. This analysis revealed that the response to glucocorticoids is highly cell type dependent, in terms of the individual genes and pathways affected, as well as the magnitude and direction of transcriptional regulation. Based on these data and given their importance in autoimmunity, we conducted functional studies with B cells. We found that glucocorticoids impair upstream B cell receptor and Toll-like receptor 7 signaling, reduce transcriptional output from the three immunoglobulin loci, and promote significant up-regulation of the genes encoding the immunomodulatory cytokine IL-10 and the terminal-differentiation factor BLIMP-1. These findings provide new mechanistic understanding of glucocorticoid action and emphasize the multifactorial, cell-specific effects of these drugs, with potential implications for designing more selective immunoregulatory therapies.
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STAR: ultrafast universal RNA-seq aligner
Alexander Dobin, Carrie Davis, Felix Schlesinger et al. · Bioinformatics · 2012 · 56.2K citations · Full text