mBio · 2019 · 56 citations · 73 references
AgricultureArchaeologyMicrobiologyBioarchaeologyFood MicrobiologyMicrobial EcologyAncient DnaBeverage MicrobiologyBiomolecular ArchaeologyFermented Foods MicrobiologyMicrobial AnalysisYeast BiologyAncient Diet ReconstructionAncient Dna IdentificationAncient Dna SequencingFermented BeveragesFermented Beverages MicrobiologyYeast Ecology In FoodsYeast Isolation
So far, most of the study of ancient organisms has been based mainly on the analysis of ancient DNA. Here we show that it is possible to isolate and study microorganisms-yeast in this case-from ancient pottery vessels used for fermentation. We demonstrate that it is highly likely that these cells are descendants of the original yeast strains that participated in the fermentation process and were absorbed into the clay matrix of the pottery vessels. Moreover, we characterized the isolated yeast strains, their genomes, and the beer they produced. These results open new and exciting avenues in the study of domesticated microorganisms and contribute significantly to the fields of bio- and experimental archaeology that aim to reconstruct ancient artifacts and products.
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Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text
BLAST+: architecture and applications
Christiam Camacho, George Coulouris, Vahram Avagyan et al. · BMC Bioinformatics · 2009 · 23.2K citations · Full text