Concepedia

Integrative analysis of pooled CRISPR genetic screens using MAGeCKFlute

Binbin Wang, Mei Wang, Wubing Zhang, Tengfei Xiao, Chen-Hao Chen, Alexander T.H. Wu, Feizhen Wu, Nicole Traugh, Xiaoqing Wang, Ziyi Li,

Nature Protocols · 2019 · 478 citations · 43 references

DOI

Concepts

References

43

Fast and accurate short read alignment with Burrows–Wheeler transform

Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text

, , +12

Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles

Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha et al. · Proceedings of the National Academy of Sciences · 2005 · 56.7K citations · Full text

, , +12

KEGG: Kyoto Encyclopedia of Genes and Genomes

Minoru Kanehisa · Nucleic Acids Research · 2000 · 39.2K citations · Full text

, , +5

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

Guangchuang Yu, Li-Gen Wang, Yanyan Han et al. · OMICS A Journal of Integrative Biology · 2012 · 38.3K citations

, , +13

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Da Wei Huang, Brad T. Sherman, Richard A. Lempicki · Nature Protocols · 2008 · 37.4K citations

, , +5