Planta · 2019 · 15 citations · 53 references
Life SciencesGeneticsMolecular BiologyComparative GenomicsGenomicsPlant GeneticsAlternative SplicingComparative Plant GenomicsCrop GenomicsLegume CropsRna Processing In PlantsRna SplicingAlternative Splicing AnalysisAlternative Splicing AnnotationAlternative Splicing ConservationGenome-wide CharacterizationIsoform IdentificationSplice Site Consensus SequencesSplice Variant Annotation
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Trimmomatic: a flexible trimmer for Illumina sequence data
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MUSCLE: multiple sequence alignment with high accuracy and high throughput
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StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
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