Concepedia

Haploinsufficiency of the intellectual disability gene SETD5 disturbs developmental gene expression and cognition

Elena Deliu, Niccolò Arecco, Jasmin Morandell, Christoph Dotter, Ximena Contreras, Charles Girardot, Eva-Lotta Käsper, Alena A. Kozlova, Kasumi Kishi, Ilaria Chiaradia,

Nature Neuroscience · 2018 · 96 citations · 79 references

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79

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love, Wolfgang Huber, Simon Anders · Genome biology · 2014 · 100.5K citations · Full text

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Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

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STAR: ultrafast universal RNA-seq aligner

Alexander Dobin, Carrie Davis, Felix Schlesinger et al. · Bioinformatics · 2012 · 56.2K citations · Full text

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Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks

Paul Shannon, Andrew Markiel, Owen Ozier et al. · Genome Research · 2003 · 54.3K citations · Full text

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<tt>edgeR</tt> : a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson, Davis J. McCarthy, Gordon K. Smyth · Bioinformatics · 2009 · 44.5K citations · Full text

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